CDS

Accession Number TCMCG009C07745
gbkey CDS
Protein Id XP_030504054.1
Location complement(join(89096144..89096263,89097154..89097312,89097417..89097680,89097771..89097964,89098133..89098933,89099377..89099968))
Gene LOC115719237
GeneID 115719237
Organism Cannabis sativa

Protein

Length 709aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA560384
db_source XM_030648194.1
Definition putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Cannabis sativa]

EGGNOG-MAPPER Annotation

COG_category S
Description Rtr1/RPAP2 family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K20827        [VIEW IN KEGG]
EC 3.1.3.16        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004721        [VIEW IN EMBL-EBI]
GO:0004722        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006470        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008420        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016311        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016791        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070940        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAAAAACCAACCTCCACTTTCTGTCAAAGACGCCGTCTACAGAATCCAACTCTCCCTTCTCCAAGGCGTTGCCAATGAGAACCAGCTTTCCACTGCTGGCTCCGTCATCTCCCGCTCCGACTACAACGACGTCGTTACCGAGCGAGCTCTCGCTAACCTCTGCGGTAACCCTCTTTGCTCCAAACCCCTTCCTTCCGATCGACCTCGTAAGAGTCGTTACCGTATCTCACTCAAGGAGCACAAGGTCTATGATCTCCAGGAGACTTATATGTATTGCTCCTCCGATTGTGTGGTCAATAGCGGTACCTTTGGTAGGAGTTTGAACGAAGAAAGGTGTTCGATTTTGGATTCTTCCAAGATTGATGCGGTTTTGGCGTTGATTGGGGATTCGAGTTCGAAAAATGAAGTGGGTTTAGGTAAAGATGGGGATTTGGGTTTTTCTAAGCTAACGATTAAGGAGAATACAGAAACCCACGATGGGAAATTGAATTTGGAGGATTGGGCTGGTCCTTCTAATGCGATTGAAGGTTATGTACCGCAGAGAGAACGGAATTTCAAGTCGGTGGGTTCGAAAATTTCCAAGAAAGGGTCTAAAGCTAAAAATCCGGTTCTTATCAATGACATGGAGTTCTCGAGTACTCTTTTCACAGAAGTTGAATATACCGTGTCCAAAACACCATTGAGCTCAAAAAATACCGGTTTTGATATTCAACTAAAAGAACCACAAGAAAAGTTGGGGAAGAAGACTGAAAATCAGTTTACTTTATTGGACACATCGTTTAATCCCATGAGCAGTGATTTAGAAACGAAAACCAAACAAATGGAAGTGGGGAGTTGTAAAGCTGTTTCAAGAGATGAGCTTGGTATTCAGGAGATGCCTTCAACTTCAGCGTCTTCCCAACTTGGCTCGCATTCAAGCTCTGAAAAAGTAGGAGAGGTATCTCATAGGACAAAGAAATTGACTGGAGCTACTCTTAAATCGTCTCTGAAAGCTTCTCGGAAAAACAAACTCAGTCGCTCTGTTACATGGGCTGATGAGAAATCTGATAGCTGCGGGAAAAGTAATCTTTGTGAGGTTAGAGAAATTGAAGATAAAAAAGAAGCTACTTCTATATTAGGCAAGAAAGGCAAAGTTCCTCTTAAACCTTCGGGGTCACTGAAAGCTGGTACCTCCATGTCTTGGGCTGATGAAAAGTGTGATACCGAAGTGTGTAAAGATACTTTTGAGGTTAGAGAAATAAAAGATTTGAATCAAACTTCTGATATGCTTAGTATGGACATTGGAGATGGTGACTTGTTGCGCCTTGCATCAGCAGAGGCTTGTGTAAATGCATTGAATGAGGCATCTGAAGCTGTTTCCGCTGGAGAATTTGAAGTCAGTGATGCAATGTCTGAAGCTGGAATTATTATATTACCACATCCAGAGGATGCAAATGGAAGAGAGTCTTTGGTGGACAAAGATACATCTGAACCAGAACAAGCTCCTTCGAAATGGCCAAAAAAACCCGTAAATCAGCATTCTGATGTGTTTAATCGCGAGGATTCTTGGTTTGATACTCCACCTGAGGGGTTTAGTTTAACATTATCACATTTTGCACAAATGTGGAATGCACTATTTACATGGACGACATCATCCACTTTGGCTTATATATATGGAAGGGACGAAAGTGTTCATGAGGAGTATTTATCAGTTAACGGAAAGGAGTATCCTCAAAAGATTGCCTTAGGAGATGGTCGTTCTTCTGAAATCAAGCAAACTCTTGCTGGTTCTCTTGCTCGAGCCTTACCTGGACTTGTTGCTGACCTCAGGCTGCCAGTTCCAGTGTCTAGTTTGGAGCAAGGAATGGGGCGTTTATTGGAAACAATGTCTTTTGTTGATGCACTGCCACCATTCAGAATAAAGCAATGGCAAGTAATTGTCCTTCTCCTCATTGAGGCTCTCTCTGTCTTTAGACTTCCTGCACTTACACCACACATGACAAATCAAAGGGTGTTGTTCCATAAGGTACTGGATGGTGCCCAAATTAGTGCTGCAGAGTACGAGATTATGAAGGATTTGATGCTACCGCTTGGCGGAACTCCCCATTTCTCAGATCAGAACGGGGTGCTTAACGAAAGAACTTAG
Protein:  
MAKNQPPLSVKDAVYRIQLSLLQGVANENQLSTAGSVISRSDYNDVVTERALANLCGNPLCSKPLPSDRPRKSRYRISLKEHKVYDLQETYMYCSSDCVVNSGTFGRSLNEERCSILDSSKIDAVLALIGDSSSKNEVGLGKDGDLGFSKLTIKENTETHDGKLNLEDWAGPSNAIEGYVPQRERNFKSVGSKISKKGSKAKNPVLINDMEFSSTLFTEVEYTVSKTPLSSKNTGFDIQLKEPQEKLGKKTENQFTLLDTSFNPMSSDLETKTKQMEVGSCKAVSRDELGIQEMPSTSASSQLGSHSSSEKVGEVSHRTKKLTGATLKSSLKASRKNKLSRSVTWADEKSDSCGKSNLCEVREIEDKKEATSILGKKGKVPLKPSGSLKAGTSMSWADEKCDTEVCKDTFEVREIKDLNQTSDMLSMDIGDGDLLRLASAEACVNALNEASEAVSAGEFEVSDAMSEAGIIILPHPEDANGRESLVDKDTSEPEQAPSKWPKKPVNQHSDVFNREDSWFDTPPEGFSLTLSHFAQMWNALFTWTTSSTLAYIYGRDESVHEEYLSVNGKEYPQKIALGDGRSSEIKQTLAGSLARALPGLVADLRLPVPVSSLEQGMGRLLETMSFVDALPPFRIKQWQVIVLLLIEALSVFRLPALTPHMTNQRVLFHKVLDGAQISAAEYEIMKDLMLPLGGTPHFSDQNGVLNERT